

Genomika proiektua
Ambar bateko moskito baten genomaren analisia

2 Exoi dauzka
E024057 exon:
ATGGAGCACACACGGCTACTCTCAGCAGTGGTGCTTCTAGGCCTACTGCTGCTGGGAAGT
GCTCCACCATCGCAAGGGGCACGAATTCTCGGCATACTGCCGTCCGTCGGCCGTTCGCAC
TACATCATCGGTGCCGGGCTGATGAAAGCACTGCTGGACGCTGGCCACGAGGTGACCATC
GTCAGTCCCTACCCGATGAAGGATGCACCGGCCGGTCTGCATCGGGACATTCTACTCCCA
GATCTGGCGACCTCCCACGGTGTCTCCGGGCCGGATCTGTTCCAGTACAAAAGTGCACCG
AACCTGATGGTCCTCTACCTGGTGTACAGTGAGATTGGCCCACAAGCGTCGGAAGCACTG
CTGCAGCACCCAAAGATGGTGGAGCTAATGCAGTCCGGCGAGCGGTTTGACGCCGTCATC
GTGGAATCGTTCGCCAGCGAGGTGCTGTACGGGCTGGCGGAACATTTCGGTGGACAGTTG
TTTGTGTTCTCGCCGTTCGGTGCGTCCATGTGGACGAACGAGCTGGTCGGTACGCCGTAC
CCGTACTCGTACATTCCGCACACCTTCCTGAGCTACACGAACGAGATGTCGTTCTGGCAG
CGGTTCACGAACGCACTCGTCGGCCATGCGGACAAGCTGTACTACCGGTGCGTGTTTCTG
CCCCAGCAGGAAGCGATGTACCGCCGGTTCTTCCCGAACGCGAAGCTCACCTTCCAGCAA
ACGCTCGAGAGCGTCCGGTTGGCGTTCGTGAATCAACACTTTACGCTGAGCTACCCCCAC
CCGTACGCACCGAACATGGTCGAGATCGGCGGGATACAGATACAGCCGGCGAAGAAGCTG
CCGGCGGACATACAGAAGTACATCGACGAGGCGCCGCACGGCGTGATCTACTTCTCGATG
GGTTCGATGCTGAAGGGCCGCAACTTCCCGGAGGACAAGCGGGCCGCGTTCGTGAACGTG
TTCCGGGGGCTGAAGGAGAACGTGATCTGGAAGTACGAGAACGACAGCCTGCCGGACAAG
CCACCGAACGTGCTGATCAAGGCGTGGATGCCGCAGAGCGACATTCTGGCCCATCCGAAG
GTGAAGCTGTTCATCACGCACGGCGGTCTGCTCGGGACGACCGAGGGCCTGTACCACGGC
AAGCCGATGGTTGGCATTCCGATTTACGGCGATCAGGAGCTCAATCTGGCCCGGGCCGAA
CAGGCCGGGTACGGCGTGAAGCTCGATTACGACACGCTCAGCGAGGAAACGATCGCGGCC
GCCATTCGGACGGTGCTGGACGGTCCGGCGTACGGCGAGCGCGCCCGGCTCATCTCCGAC
CGGTACCGCGATCAACCGCTCGGTCCCGCCAAGGCTGCGGTCTACTGGGTGGAGTACGTA
CTGCGCCATAAGGGTGCCCCGCAGCTACAGTCCCCGTCCGTGCGGTTGTCCTTCGTCCAG
TACAATCTGCTGGACGTGTACGCGGTTATGGGTGCGATCGCTTTATCAGTGCTAATTGGG
GCGGGGTTGATGCTGCGGGCA
E024058 exon:
TTGCTAACCAGCCGAGCAAACCTTAGAAAAAAAAAAGCCAAACCAAATTCGCCAATTCGG
CAATGTGCCAAAGATGTTGGAGAGGAAGTGGGCTGGTGA
Informazio nukleotidikoa
Atzera
Kokapena kromosoman

cDNA
ATGGAGCACACACGGCTACTCTCAGCAGTGGTGCTTCTAGGCCTACTGCTGCTGGGAAGT
GCTCCACCATCGCAAGGGGCACGAATTCTCGGCATACTGCCGTCCGTCGGCCGTTCGCAC
TACATCATCGGTGCCGGGCTGATGAAAGCACTGCTGGACGCTGGCCACGAGGTGACCATC
GTCAGTCCCTACCCGATGAAGGATGCACCGGCCGGTCTGCATCGGGACATTCTACTCCCA
GATCTGGCGACCTCCCACGGTGTCTCCGGGCCGGATCTGTTCCAGTACAAAAGTGCACCG
AACCTGATGGTCCTCTACCTGGTGTACAGTGAGATTGGCCCACAAGCGTCGGAAGCACTG
CTGCAGCACCCAAAGATGGTGGAGCTAATGCAGTCCGGCGAGCGGTTTGACGCCGTCATC
GTGGAATCGTTCGCCAGCGAGGTGCTGTACGGGCTGGCGGAACATTTCGGTGGACAGTTG
TTTGTGTTCTCGCCGTTCGGTGCGTCCATGTGGACGAACGAGCTGGTCGGTACGCCGTAC
CCGTACTCGTACATTCCGCACACCTTCCTGAGCTACACGAACGAGATGTCGTTCTGGCAG
CGGTTCACGAACGCACTCGTCGGCCATGCGGACAAGCTGTACTACCGGTGCGTGTTTCTG
CCCCAGCAGGAAGCGATGTACCGCCGGTTCTTCCCGAACGCGAAGCTCACCTTCCAGCAA
ACGCTCGAGAGCGTCCGGTTGGCGTTCGTGAATCAACACTTTACGCTGAGCTACCCCCAC
CCGTACGCACCGAACATGGTCGAGATCGGCGGGATACAGATACAGCCGGCGAAGAAGCTG
CCGGCGGACATACAGAAGTACATCGACGAGGCGCCGCACGGCGTGATCTACTTCTCGATG
GGTTCGATGCTGAAGGGCCGCAACTTCCCGGAGGACAAGCGGGCCGCGTTCGTGAACGTG
TTCCGGGGGCTGAAGGAGAACGTGATCTGGAAGTACGAGAACGACAGCCTGCCGGACAAG
CCACCGAACGTGCTGATCAAGGCGTGGATGCCGCAGAGCGACATTCTGGCCCATCCGAAG
GTGAAGCTGTTCATCACGCACGGCGGTCTGCTCGGGACGACCGAGGGCCTGTACCACGGC
AAGCCGATGGTTGGCATTCCGATTTACGGCGATCAGGAGCTCAATCTGGCCCGGGCCGAA
CAGGCCGGGTACGGCGTGAAGCTCGATTACGACACGCTCAGCGAGGAAACGATCGCGGCC
GCCATTCGGACGGTGCTGGACGGTCCGGCGTACGGCGAGCGCGCCCGGCTCATCTCCGAC
CGGTACCGCGATCAACCGCTCGGTCCCGCCAAGGCTGCGGTCTACTGGGTGGAGTACGTA
CTGCGCCATAAGGGTGCCCCGCAGCTACAGTCCCCGTCCGTGCGGTTGTCCTTCGTCCAG
TACAATCTGCTGGACGTGTACGCGGTTATGGGTGCGATCGCTTTATCAGTGCTAATTGGG
GCGGGGTTGATGCTGCGGGCATTGCTAACCAGCCGAGCAAACCTTAGAAAAAAAAAAGCC
AAACCAAATTCGCCAATTCGGCAATGTGCCAAAGATGTTGGAGAGGAAGTGGGCTGGTGA
Sekuentzia promotorearen analisia


Query 1 GCAGGGTGCAACGGTCTTGTTGGCACAAGTTTTGCTTACTAACGTGCATAAGCAAAACAA 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GCAGGGTGCAACGGTCTTGTTGGCACAAGTTTTGCTTACTAACGTGCATAAGCAAAACAA 60
Query 61 GCAAAGCGATCTGATACGGTTTGCCATCTTCCGACGCATGCGCAACCGGGACTGGTGCGT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GCAAAGCGATCTGATACGGTTTGCCATCTTCCGACGCATGCGCAACCGGGACTGGTGCGT 120
Query 121 ACTGAGCTTTGGTGCGCTATCACTCTGGTTGGTCGCGGTTGGGAGAACGTTTTATGTTCT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 ACTGAGCTTTGGTGCGCTATCACTCTGGTTGGTCGCGGTTGGGAGAACGTTTTATGTTCT 180
Query 181 CCTAATCTAACGTATGACAGAGAGTACAGTAGGGTACGAGAAATGAAGAGAGAGACAGTG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CCTAATCTAACGTATGACAGAGAGTACAGTAGGGTACGAGAAATGAAGAGAGAGACAGTG 240
Query 241 AGAGAGATTTTGAATGAAATTCACAGATTACTCAGGTGCTCTGCGCTCGCTCCCTTATGC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 AGAGAGATTTTGAATGAAATTCACAGATTACTCAGGTGCTCTGCGCTCGCTCCCTTATGC 300
Query 301 TCGTATGATAAGACTACACGCCGCGCTGTGCGAAAGGGTTCCCATCCAAACCCAATCCTA 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TCGTATGATAAGACTACACGCCGCGCTGTGCGAAAGGGTTCCCATCCAAACCCAATCCTA 360
Query 361 GTAGGCAACTAGTCGGTACTAACAAACGGCACCGTTCGGTCGGGTGGGTGACTAGTGTCC 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GTAGGCAACTAGTCGGTACTAACAAACGGCACCGTTCGGTCGGGTGGGTGACTAGTGTCC 420
Query 421 TGTCCGATTCGGTTCAGTTTCAATTTTTTGTCACTCGAGTGATAACCCTTCAGCCGGTCA 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 TGTCCGATTCGGTTCAGTTTCAATTTTTTGTCACTCGAGTGATAACCCTTCAGCCGGTCA 480
Query 481 ACCTTAACCATCGCGCAATC 500
||||||||||||||||||||
Sbjct 481 ACCTTAACCATCGCGCAATC 500
Datu baseko promotore sekuentziarekin lerrokatuz gero, ikus dezakegu kontig honetan ere ez dela aldakortasunik eman, oso kontserbakorra den gunea da, bere garrantziaren erakusle dena, beraz, datu baseko transkripzio faktore lotura guneak jarriko ditugu. Dena den, ez dagoenez aukerarik Anopheles gambie-ren transkripzio faktore eta lotura guneak aukeratzeko, gehien hurbiltzen zaizkionak ezarri ditugu, diptera-renak hain zuzen ere, hau baita bere ordena.
